# NAMD configuration file for uuuuu

# molecular system
structure	../output/uuuuu.psf

# force field
paratypecharmm	on
parameters	../par_all27_prot_na.prm
exclude		scaled1-4
1-4scaling	1.0

#Constant Forces
#constantforce yes
#consforcefile output/xxxxx.pdb

# approximations
switching	on
switchdist	8
cutoff		12
pairlistdist	13.5
margin		0
stepspercycle	20

#integrator
timestep 1.0

#output
outputenergies	10
outputtiming	100
binaryoutput	no
imdon		yes
imdfreq		1
imdport		3111

# molecular system
coordinates	output/xxxxx.coor

#output
outputname	output/yyyyy	
dcdfreq		10

#protocol
temperature	vvvvv
langevin	on
langevinDamping wwwww	
langevinTemp	vvvvv

rescaleFreq 1
rescaleTemp vvvvv 

#script

#minimize 200

run zzzzz 

