Metadata-Version: 2.1
Name: multiqc
Version: 1.14
Summary: Create aggregate bioinformatics analysis reports across many samples and tools
Home-page: http://multiqc.info
Download-URL: https://github.com/ewels/MultiQC/tarball/v1.14
Author: Phil Ewels
Author-email: phil.ewels@seqera.io
License: GPLv3
Keywords: bioinformatics,biology,sequencing,NGS,next generation sequencing,quality control
Classifier: Development Status :: 5 - Production/Stable
Classifier: Environment :: Console
Classifier: Environment :: Web Environment
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Natural Language :: English
Classifier: Operating System :: MacOS :: MacOS X
Classifier: Operating System :: POSIX
Classifier: Operating System :: Unix
Classifier: Programming Language :: Python
Classifier: Programming Language :: JavaScript
Classifier: Topic :: Scientific/Engineering
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Scientific/Engineering :: Visualization
License-File: LICENSE
Requires-Dist: matplotlib>=2.1.1
Requires-Dist: networkx>=2.5.1
Requires-Dist: numpy
Requires-Dist: click
Requires-Dist: coloredlogs
Requires-Dist: future>0.14.0
Requires-Dist: jinja2>=3.0.0
Requires-Dist: lzstring
Requires-Dist: markdown
Requires-Dist: pyyaml>=4
Requires-Dist: requests
Requires-Dist: rich>=10
Requires-Dist: rich-click
Requires-Dist: simplejson
Requires-Dist: spectra>=0.0.10


MultiQC is a tool to aggregate bioinformatics results across many samples into a single report. It is written in Python and contains modules for a large number of common bioinformatics tools.

You can install MultiQC from PyPI as follows::

    pip install multiqc

Then it's just a case of going to your analysis directory and running the script::

    multiqc .

MultiQC will scan the specified directory (:code:`'.'` is the current dir) and produce a report detailing whatever it finds.

The report is created in :code:`multiqc_report.html` by default. Tab-delimited data files are created in :code:`multiqc_data/` to give easy access for downstream processing.

For more detailed instructions, run :code:`multiqc -h`

See the MultiQC website for documentation and tutorial videos: http://multiqc.info

MultiQC was written by Phil Ewels (http://phil.ewels.co.uk) at Seqera Labs (https://seqera.io/), originally at SciLifeLab Sweden (http://www.scilifelab.se)
